Data generated before October 29 is now available through NG6 and the download features (generation of URL and symbolic links on the Genobioinfo cluster only), using backup data.
Current issue (01/11/2023)
The Genotoul Bioinformatics facility has a serious issue with the storage system that impact the NG6 accessibility. We understand the inconvenience this may cause and appreciate your patience during this time. We will keep you updated on the progress and provide an update as soon as the server is back online.
NG6 v3.2 is available on https://forgemia.inra.fr/genotoul-bioinfo/ng6/tags. Illumina pipelines were greatly improved (less time to make the data and analysis results available). An Oxford nanopore Technologies pipeline is now available. Can now work with slurm and sge. All runs come with a md5 sum file for raw data. New interface to manage projects and purge associated data is now included.
August 30 2017
From now, Illumina data generated by GeT-PlaGe core facility and loaded in nG6 will include the flowcell barcode in the fastq.gz file names, in order to made them unique accross all runs.
June 17 2013
NG6 v2.0 is now available. This new version is based upon the jflow workflow engine instead of ergatis. This version is comming with several new features for runs administrators.
November 27 2012
NG6 is now only available in english.
September 14 2012
New user management system. 3 rights levels: administrator (in charge to run workflows), manager (in charge to manage project access) and member (browsing projects/runs/analyses).
Next generation sequencing platforms are now well implanted in sequencing centres and some laboratories. Smaller
scale machines such as the 454 junior from Roche or the MiSeq from Illumina will increase the number of laboratories
hosting a sequencer. In such a context, it is important to provide these teams with an easily manageable environment
to store and process the produced reads. NG6 is a complete information system designed to answer the needs of a sequencing
platform. It provides a user-friendly interface to process, store and download high-throughput sequencing data.